org.gcube.dataanalysis.JobSMspd

Class OccurencesProcedure

java.lang.Object

org.gcube.dataanalysis.ecoengine.interfaces.StandardLocalExternalAlgorithm

org.gcube.dataanalysis.JobSMspd.OccurencesProcedure

All Implemented Interfaces:

org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent, org.gcube.dataanalysis.ecoengine.interfaces.Transducerer

public class OccurencesProcedure
extends org.gcube.dataanalysis.ecoengine.interfaces.StandardLocalExternalAlgorithm

Field Summary

Fields

Modifier and Type	Field and Description
protected String	fileName

Fields inherited from class org.gcube.dataanalysis.ecoengine.interfaces.StandardLocalExternalAlgorithm

config, inputs, outputParameters, resourceManager, status

Constructor Summary

Constructors

Constructor and Description
OccurencesProcedure()

Method Summary

Methods

Modifier and Type	Method and Description
void	fulfilParameters()
String	getDescription()
org.gcube.dataanalysis.ecoengine.datatypes.StatisticalType	getOutput()
void	init()
static void	mergeFiles(File[] files, File mergedFile)
protected void	process()
protected void	setInputParameters()
void	shutdown()

Methods inherited from class org.gcube.dataanalysis.ecoengine.interfaces.StandardLocalExternalAlgorithm

addDoubleInput, addEnumerateInput, addIntegerInput, addOutputString, addRemoteDatabaseInput, addStringInput, compute, getInfrastructure, getInputParameter, getInputParameters, getResourceLoad, getResources, getStatus, log, setConfiguration

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

fileName

protected String fileName

Constructor Detail

OccurencesProcedure

public OccurencesProcedure()

Method Detail

getDescription

public String getDescription()

Specified by:

getDescription in interface org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent

Specified by:

getDescription in class org.gcube.dataanalysis.ecoengine.interfaces.StandardLocalExternalAlgorithm

init

public void init()
          throws Exception

Specified by:

init in interface org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent

Specified by:

init in class org.gcube.dataanalysis.ecoengine.interfaces.StandardLocalExternalAlgorithm

Throws:

Exception

fulfilParameters

public void fulfilParameters()
                      throws IOException

Throws:

IOException

process

protected void process()
                throws Exception

Specified by:

process in class org.gcube.dataanalysis.ecoengine.interfaces.StandardLocalExternalAlgorithm

Throws:

Exception

shutdown

public void shutdown()

Specified by:

shutdown in interface org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent

Specified by:

shutdown in class org.gcube.dataanalysis.ecoengine.interfaces.StandardLocalExternalAlgorithm

setInputParameters

protected void setInputParameters()

Specified by:

setInputParameters in class org.gcube.dataanalysis.ecoengine.interfaces.StandardLocalExternalAlgorithm

getOutput

public org.gcube.dataanalysis.ecoengine.datatypes.StatisticalType getOutput()

Specified by:

getOutput in interface org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent

Overrides:

getOutput in class org.gcube.dataanalysis.ecoengine.interfaces.StandardLocalExternalAlgorithm

mergeFiles

public static void mergeFiles(File[] files,
              File mergedFile)