de.uni_jena.cs.fusion.client.worms

Class AphiaRecord

java.lang.Object

de.uni_jena.cs.fusion.client.worms.AphiaRecord

public class AphiaRecord
extends Object

Since:

1.0.0

Author:

Jan Martin Keil

Field Summary

Fields

Modifier and Type	Field and Description
long	aphiaId Unique and persistent identifier within WoRMS.
String	authority the authorship information for the scientific name formatted according to the conventions of the applicable nomenclaturalCode
String	citation a bibliographic reference for the resource as a statement indicating how this record should be cited (attributed) when used
Boolean	isBrackish a boolean flag indicating whether the taxon occurrs in brackish habitats.
Boolean	isExtinct a flag indicating an extinct organism.
Boolean	isFreshwater a boolean flag indicating whether the taxon occurrs in freshwater habitats, i.e.
Boolean	isMarine a boolean flag indicating whether the taxon is a marine organism, i.e.
Boolean	isTerrestrial a boolean flag indicating the taxon is a terrestial organism, i.e.
String	lsid LifeScience Identifier.
MatchType	matchType Type of match.
String	modified The most recent date-time in GMT on which the resource was changed
String	parentNameUsageID
String	scientificName the full scientific name without authorship
String	status the status of the use of the scientific name (usually a taxonomic opinion).
String	taxonomicClass the full scientific name of the class in which the taxon is classified
String	taxonomicFamily the full scientific name of the family in which the taxon is classified
String	taxonomicGenus the full scientific name of the genus in which the taxon is classified
String	taxonomicKingdom the full scientific name of the kingdom in which the taxon is classified
String	taxonomicOrder the full scientific name of the order in which the taxon is classified
String	taxonomicPhylum the full scientific name of the phylum or division in which the taxon is classified
String	taxonomicRank the taxonomic rank of the most specific name in the scientific name
String	taxonRankID
String	unacceptReason the reason why a scientific name is unaccepted
String	url HTTP URL to the AphiaRecord
long	validAphiaId the AphiaID (for the scientific name) of the currently accepted taxon.
String	validAuthority the authorship information for the scientific name of the currently accepted taxon
String	validName the scientific name of the currently accepted taxon

Constructor Summary

Constructors

Constructor and Description
AphiaRecord()

Method Summary

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

aphiaId

public long aphiaId

Unique and persistent identifier within WoRMS. Primary key in the database.

url

public String url

HTTP URL to the AphiaRecord

scientificName

public String scientificName

the full scientific name without authorship

authority

public String authority

the authorship information for the scientific name formatted according to the conventions of the applicable nomenclaturalCode

taxonomicRank

public String taxonomicRank

the taxonomic rank of the most specific name in the scientific name

status

public String status

the status of the use of the scientific name (usually a taxonomic opinion). Additional technical statuses are (1) quarantined: hidden from public interface after decision from an editor and (2) deleted: AphiaID should NOT be used anymore, please replace it by the valid_AphiaID

taxonRankID

public String taxonRankID

parentNameUsageID

public String parentNameUsageID

unacceptReason

public String unacceptReason

the reason why a scientific name is unaccepted

validAphiaId

public long validAphiaId

the AphiaID (for the scientific name) of the currently accepted taxon. NULL if there is no currently accepted taxon.

validName

public String validName

the scientific name of the currently accepted taxon

validAuthority

public String validAuthority

the authorship information for the scientific name of the currently accepted taxon

taxonomicKingdom

public String taxonomicKingdom

the full scientific name of the kingdom in which the taxon is classified

taxonomicPhylum

public String taxonomicPhylum

the full scientific name of the phylum or division in which the taxon is classified

taxonomicClass

public String taxonomicClass

the full scientific name of the class in which the taxon is classified

taxonomicOrder

public String taxonomicOrder

the full scientific name of the order in which the taxon is classified

taxonomicFamily

public String taxonomicFamily

the full scientific name of the family in which the taxon is classified

taxonomicGenus

public String taxonomicGenus

the full scientific name of the genus in which the taxon is classified

citation

public String citation

a bibliographic reference for the resource as a statement indicating how this record should be cited (attributed) when used

lsid

public String lsid

LifeScience Identifier. Persistent GUID for an AphiaID

isMarine

public Boolean isMarine

a boolean flag indicating whether the taxon is a marine organism, i.e. can be found in/above sea water. Possible values: 0/1/NULL

isBrackish

public Boolean isBrackish

a boolean flag indicating whether the taxon occurrs in brackish habitats. Possible values: 0/1/NULL

isFreshwater

public Boolean isFreshwater

a boolean flag indicating whether the taxon occurrs in freshwater habitats, i.e. can be found in/above rivers or lakes. Possible values: 0/1/NULL

isTerrestrial

public Boolean isTerrestrial

a boolean flag indicating the taxon is a terrestial organism, i.e. occurrs on land as opposed to the sea. Possible values: 0/1/NULL

isExtinct

public Boolean isExtinct

a flag indicating an extinct organism. Possible values: 0/1/NULL

matchType

public MatchType matchType

Type of match.

modified

public String modified

The most recent date-time in GMT on which the resource was changed

Constructor Detail

AphiaRecord

public AphiaRecord()