org.gcube.data.spd.ncbi
Class NcbiPlugin

java.lang.Object
  org.gcube.data.spd.plugin.fwk.AbstractPlugin
      org.gcube.data.spd.ncbi.NcbiPlugin

All Implemented Interfaces:

org.gcube.data.spd.plugin.fwk.model.Searchable<org.gcube.data.spd.plugin.fwk.model.ResultItem>, org.gcube.data.spd.plugin.fwk.PropertySupport

public class NcbiPlugin
extends org.gcube.data.spd.plugin.fwk.AbstractPlugin

Field Summary

static String	credits
static String	jdbc
static String	password
static Hashtable<String,String>	tables
static String	username

Constructor Summary

NcbiPlugin()

Method Summary

org.gcube.data.spd.plugin.fwk.capabilities.ClassificationCapability	getClassificationInterface()
String	getDescription()
org.gcube.data.spd.plugin.fwk.capabilities.NamesMappingCapability	getNamesMappingInterface()
String	getRepositoryName()
Set<org.gcube.data.spd.plugin.fwk.Capabilities>	getSupportedCapabilities()
Set<org.gcube.data.spd.plugin.fwk.SearchTypes>	getSupportedSearch()
org.gcube.data.spd.plugin.fwk.capabilities.SynonimsCapability	getSynonimsInterface()
void	initialize(org.gcube.common.core.resources.GCUBERuntimeResource res)
void	searchByCommonName(String commonName, org.gcube.data.spd.plugin.fwk.writers.ObjectWriter<org.gcube.data.spd.plugin.fwk.model.ResultItem> writer, org.gcube.data.spd.plugin.fwk.Property... arg2)
void	searchByScientificName(String scientificName, org.gcube.data.spd.plugin.fwk.writers.ObjectWriter<org.gcube.data.spd.plugin.fwk.model.ResultItem> writer, org.gcube.data.spd.plugin.fwk.Property... properties)
static boolean	SQLTableExists(String tableName) Return true if a table exists

Methods inherited from class org.gcube.data.spd.plugin.fwk.AbstractPlugin

equals, getHandledClass, getOccurrencesInterface, getSupportedProperties, hashCode, isInitialized, isUseCache, setUseCache, shutdown, update

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, toString, wait, wait, wait

Field Detail

jdbc

public static String jdbc

username

public static String username

password

public static String password

tables

public static Hashtable<String,String> tables

credits

public static final String credits

See Also:

Constant Field Values

Constructor Detail

NcbiPlugin

public NcbiPlugin()

Method Detail

initialize

public void initialize(org.gcube.common.core.resources.GCUBERuntimeResource res)
                throws Exception

Overrides:

initialize in class org.gcube.data.spd.plugin.fwk.AbstractPlugin

Throws:

Exception

getDescription

public String getDescription()

Specified by:

getDescription in class org.gcube.data.spd.plugin.fwk.AbstractPlugin

getRepositoryName

public String getRepositoryName()

Specified by:

getRepositoryName in class org.gcube.data.spd.plugin.fwk.AbstractPlugin

getSupportedSearch

public Set<org.gcube.data.spd.plugin.fwk.SearchTypes> getSupportedSearch()

Overrides:

getSupportedSearch in class org.gcube.data.spd.plugin.fwk.AbstractPlugin

getSupportedCapabilities

public Set<org.gcube.data.spd.plugin.fwk.Capabilities> getSupportedCapabilities()

Overrides:

getSupportedCapabilities in class org.gcube.data.spd.plugin.fwk.AbstractPlugin

getClassificationInterface

public org.gcube.data.spd.plugin.fwk.capabilities.ClassificationCapability getClassificationInterface()

Overrides:

getClassificationInterface in class org.gcube.data.spd.plugin.fwk.AbstractPlugin

getSynonimsInterface

public org.gcube.data.spd.plugin.fwk.capabilities.SynonimsCapability getSynonimsInterface()

Overrides:

getSynonimsInterface in class org.gcube.data.spd.plugin.fwk.AbstractPlugin

getNamesMappingInterface

public org.gcube.data.spd.plugin.fwk.capabilities.NamesMappingCapability getNamesMappingInterface()

Overrides:

getNamesMappingInterface in class org.gcube.data.spd.plugin.fwk.AbstractPlugin

searchByCommonName

public void searchByCommonName(String commonName,
                               org.gcube.data.spd.plugin.fwk.writers.ObjectWriter<org.gcube.data.spd.plugin.fwk.model.ResultItem> writer,
                               org.gcube.data.spd.plugin.fwk.Property... arg2)

Specified by:

searchByCommonName in interface org.gcube.data.spd.plugin.fwk.model.Searchable<org.gcube.data.spd.plugin.fwk.model.ResultItem>

Specified by:

searchByCommonName in class org.gcube.data.spd.plugin.fwk.AbstractPlugin

searchByScientificName

public void searchByScientificName(String scientificName,
                                   org.gcube.data.spd.plugin.fwk.writers.ObjectWriter<org.gcube.data.spd.plugin.fwk.model.ResultItem> writer,
                                   org.gcube.data.spd.plugin.fwk.Property... properties)

Specified by:

searchByScientificName in interface org.gcube.data.spd.plugin.fwk.model.Searchable<org.gcube.data.spd.plugin.fwk.model.ResultItem>

Specified by:

searchByScientificName in class org.gcube.data.spd.plugin.fwk.AbstractPlugin

SQLTableExists

public static boolean SQLTableExists(String tableName)

Return true if a table exists