A B C D E F G H I K L M N O P R S T U V W Z
All Classes All Packages

A

accessToken - Variable in class org.gcube.common.software.processor.zenodo.ZenodoExporter

actualizeProcessorConfig(ProcessorConfig, SoftwareArtifactMetadata) - Method in class org.gcube.common.software.analyser.Analyser

actualizeSoftwareArtifactConfig(JsonNode) - Method in class org.gcube.common.software.analyser.Analyser

addAdditionalProperty(String, JsonNode) - Method in class org.gcube.common.software.model.SoftwareArtifactMetadata

addFilesToDeposition(List<File>) - Method in class org.gcube.common.software.processor.zenodo.ZenodoExporter

ADDITIONAL_HTML_DESCRIPTION_CONFIG_FIELD_NAME - Static variable in class org.gcube.common.software.processor.zenodo.ZenodoExporter

additionalProperties - Variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

addProperty(String, Object) - Method in class org.gcube.common.software.model.Variables

addProperty(String, JsonNode) - Method in class org.gcube.common.software.model.GlobalConfig

addProperty(String, JsonNode) - Method in class org.gcube.common.software.model.ProcessorConfig

ALL - org.gcube.common.software.model.ElaborationType

analyse() - Method in class org.gcube.common.software.analyser.Analyser

Analyser - Class in org.gcube.common.software.analyser

Analyser() - Constructor for class org.gcube.common.software.analyser.Analyser

AnalyserFactory - Class in org.gcube.common.software.analyser

AnalyserFactory() - Constructor for class org.gcube.common.software.analyser.AnalyserFactory

artifactMetadataArray - Variable in class org.gcube.common.software.analyser.Analyser

ARTIFACTS_PROPERTY_NAME - Static variable in class org.gcube.common.software.analyser.AnalyserFactory

authors - Variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

AUTHORS_PROPERTY_NAME - Static variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

availableProcessors - Static variable in class org.gcube.common.software.processor.SoftwareArtifactProcessor

B

BibLaTeXExporter - Class in org.gcube.common.software.processor.biblatex

BibLaTeXExporter() - Constructor for class org.gcube.common.software.processor.biblatex.BibLaTeXExporter

C

checkProcessors(Set<String>, Set<String>) - Method in class org.gcube.common.software.analyser.Analyser

CODE_LOCATION_PROPERTY_NAME - Static variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

codeLocation - Variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

COMMUNITIES_FIELD_NAME - Static variable in class org.gcube.common.software.processor.zenodo.ZenodoExporter

CONCEPT_DOI_URL_PROPERTY_NAME - Static variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

conceptDOIURL - Variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

Config - Class in org.gcube.common.software.config

Config() - Constructor for class org.gcube.common.software.config.Config

CONFIGURATION_PROPERTY_NAME - Static variable in class org.gcube.common.software.analyser.AnalyserFactory

create() - Method in class org.gcube.common.software.processor.zenodo.ZenodoExporter

createZenodoDOIURLFromID(String) - Method in class org.gcube.common.software.processor.zenodo.ZenodoExporter

D

date - Variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

DATE_PROPERTY_NAME - Static variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

DATETIME_PATTERN - Static variable in class org.gcube.common.software.utils.Utils

DateTime Pattern to be used to serialize Dates

deletePreviousFiles() - Method in class org.gcube.common.software.processor.zenodo.ZenodoExporter

Remove previous depositionFiles

DEPOSITION_PATH - Static variable in class org.gcube.common.software.processor.zenodo.ZenodoExporter

DEPOSITIONS_COLLECTION_PATH - Static variable in class org.gcube.common.software.processor.zenodo.ZenodoExporter

DEPOSTION_EDIT_PATH - Static variable in class org.gcube.common.software.processor.zenodo.ZenodoExporter

DEPOSTION_FILES_PATH - Static variable in class org.gcube.common.software.processor.zenodo.ZenodoExporter

DEPOSTION_NEW_VERSION_PATH - Static variable in class org.gcube.common.software.processor.zenodo.ZenodoExporter

DEPOSTION_PUBLISH_PATH - Static variable in class org.gcube.common.software.processor.zenodo.ZenodoExporter

DESCRIPTION_PROPERTY_NAME - Static variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

desiredName - Variable in class org.gcube.common.software.model.SoftwareArtifactFile

doiBaseURL - Variable in class org.gcube.common.software.processor.zenodo.ZenodoExporter

downloadFile() - Method in class org.gcube.common.software.model.SoftwareArtifactFile

E

elaboration - Variable in class org.gcube.common.software.model.ProcessorConfig

ELABORATION_PROPERTY_NAME - Static variable in class org.gcube.common.software.model.ProcessorConfig

ElaborationType - Enum in org.gcube.common.software.model

export() - Method in class org.gcube.common.software.processor.biblatex.BibLaTeXExporter

export() - Method in class org.gcube.common.software.processor.SoftwareArtifactProcessor

export() - Method in class org.gcube.common.software.processor.zenodo.ZenodoExporter

EXPORT_FILENAME_EXTENSION - Static variable in class org.gcube.common.software.analyser.AnalyserFactory

EXPORT_FILENAME_EXTENSION - Static variable in class org.gcube.common.software.processor.biblatex.BibLaTeXExporter

EXPORT_FILENAME_EXTENSION - Static variable in class org.gcube.common.software.processor.zenodo.ZenodoExporter

EXPORT_FILENAME_PROPERTY_NAME - Static variable in class org.gcube.common.software.model.GlobalConfig

exportFileNameExtension - Variable in class org.gcube.common.software.processor.SoftwareArtifactProcessor

F

files - Variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

FILES_PROPERTY_NAME - Static variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

FileUtils - Class in org.gcube.common.software.utils

FileUtils() - Constructor for class org.gcube.common.software.utils.FileUtils

finalize() - Method in class org.gcube.common.software.processor.zenodo.ZenodoExporter

findVariables(String) - Method in class org.gcube.common.software.model.Variables

Search the variables used in the String provided as argument

first - Variable in class org.gcube.common.software.processor.SoftwareArtifactProcessor

G

generate() - Method in class org.gcube.common.software.processor.biblatex.BibLaTeXExporter

getAccessTokenQueryParamters() - Method in class org.gcube.common.software.processor.zenodo.ZenodoExporter

getAdditionalProperties() - Method in class org.gcube.common.software.model.SoftwareArtifactMetadata

getAdditionalProperty(String) - Method in class org.gcube.common.software.model.SoftwareArtifactMetadata

getAnalyser(File) - Static method in class org.gcube.common.software.analyser.AnalyserFactory

getAnalyser(String) - Static method in class org.gcube.common.software.analyser.AnalyserFactory

getAnalyser(String, String) - Static method in class org.gcube.common.software.analyser.AnalyserFactory

getAnalyser(JsonNode) - Static method in class org.gcube.common.software.analyser.AnalyserFactory

getAnalyser(JsonNode, JsonNode) - Static method in class org.gcube.common.software.analyser.AnalyserFactory

getArtifactMetadataArray() - Method in class org.gcube.common.software.analyser.Analyser

getAuthors() - Method in class org.gcube.common.software.model.SoftwareArtifactMetadata

getAvailableProcessors() - Static method in class org.gcube.common.software.processor.SoftwareArtifactProcessor

getCodeLocation() - Method in class org.gcube.common.software.model.SoftwareArtifactMetadata

getConceptDOIURL() - Method in class org.gcube.common.software.model.SoftwareArtifactMetadata

getConfig(String) - Method in class org.gcube.common.software.processor.zenodo.ZenodoExporter

getDate() - Method in class org.gcube.common.software.model.SoftwareArtifactMetadata

getDateAsString(Date) - Static method in class org.gcube.common.software.utils.Utils

getDesiredName() - Method in class org.gcube.common.software.model.SoftwareArtifactFile

getElaborationType() - Method in class org.gcube.common.software.model.ProcessorConfig

getExportFileName(String) - Method in class org.gcube.common.software.model.GlobalConfig

getFileFromFilename(String) - Static method in class org.gcube.common.software.utils.FileUtils

getFileName() - Method in class org.gcube.common.software.model.GlobalConfig

getFiles() - Method in class org.gcube.common.software.model.SoftwareArtifactMetadata

getGlobalConfig() - Method in class org.gcube.common.software.processor.SoftwareArtifactProcessor

getGlobalConfig(JsonNode) - Method in class org.gcube.common.software.analyser.Analyser

getGlobalConfiguration() - Method in class org.gcube.common.software.analyser.Analyser

getGrants() - Method in class org.gcube.common.software.model.SoftwareArtifactMetadata

getKeywords() - Method in class org.gcube.common.software.model.SoftwareArtifactMetadata

getLicense() - Method in class org.gcube.common.software.model.SoftwareArtifactMetadata

getName() - Method in class org.gcube.common.software.model.SoftwareArtifactMetadata

getNext() - Method in class org.gcube.common.software.model.SoftwareArtifactMetadata

getObjectMapper() - Static method in class org.gcube.common.software.utils.Utils

getObjectNode() - Method in class org.gcube.common.software.processor.zenodo.ZenodoExporter

getOriginalJson() - Method in class org.gcube.common.software.model.GlobalConfig

getOriginalJson() - Method in class org.gcube.common.software.model.SoftwareArtifactMetadata

getOutputFile() - Method in class org.gcube.common.software.processor.SoftwareArtifactProcessor

getOutputFile() - Method in class org.gcube.common.software.processor.zenodo.ZenodoExporter

getPrevious() - Method in class org.gcube.common.software.model.SoftwareArtifactMetadata

getProcessorConfig() - Method in class org.gcube.common.software.processor.SoftwareArtifactProcessor

getProcessorConfigurations() - Method in class org.gcube.common.software.model.GlobalConfig

getProperties() - Static method in class org.gcube.common.software.config.Config

getProperties() - Method in class org.gcube.common.software.model.GlobalConfig

getProperties() - Method in class org.gcube.common.software.model.ProcessorConfig

getProperties() - Method in class org.gcube.common.software.model.Variables

getProperty(String) - Method in class org.gcube.common.software.model.GlobalConfig

getProperty(String) - Method in class org.gcube.common.software.model.ProcessorConfig

getResponse(HttpURLConnection) - Method in class org.gcube.common.software.processor.zenodo.ZenodoExporter

getSoftwareArtifactConfig() - Method in class org.gcube.common.software.processor.SoftwareArtifactProcessor

getStringBuilder(InputStream) - Method in class org.gcube.common.software.processor.zenodo.ZenodoExporter

getTemplate() - Method in class org.gcube.common.software.processor.biblatex.BibLaTeXExporter

getTitle() - Method in class org.gcube.common.software.model.SoftwareArtifactMetadata

getURL() - Method in class org.gcube.common.software.model.SoftwareArtifactFile

getVariables() - Method in class org.gcube.common.software.model.SoftwareArtifactMetadata

getVersion() - Method in class org.gcube.common.software.model.SoftwareArtifactMetadata

getVersionDOIURL() - Method in class org.gcube.common.software.model.SoftwareArtifactMetadata

getZenodoConnectionConfig() - Method in class org.gcube.common.software.processor.zenodo.ZenodoExporter

getZenodoIDFromDOIURL(String) - Method in class org.gcube.common.software.processor.zenodo.ZenodoExporter

getZenodoIDFromDOIURL(URL) - Method in class org.gcube.common.software.processor.zenodo.ZenodoExporter

globalConfig - Variable in class org.gcube.common.software.processor.SoftwareArtifactProcessor

GlobalConfig - Class in org.gcube.common.software.model

GlobalConfig() - Constructor for class org.gcube.common.software.model.GlobalConfig

globalConfiguration - Variable in class org.gcube.common.software.analyser.Analyser

grants - Variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

GRANTS_PROPERTY_NAME - Static variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

GUCBE_ZENODO_SOFTWARE_DEPOSIT - Static variable in class org.gcube.common.software.processor.zenodo.ZenodoExporter

H

HTML_DESCRIPTION_CONFIG_FIELD_NAME - Static variable in class org.gcube.common.software.processor.zenodo.ZenodoExporter

I

isNewDeposition() - Method in class org.gcube.common.software.model.SoftwareArtifactMetadata

K

keywords - Variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

KEYWORDS_PROPERTY_NAME - Static variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

L

last - Variable in class org.gcube.common.software.processor.SoftwareArtifactProcessor

license - Variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

LICENSE_PROPERTY_NAME - Static variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

M

merge(JsonNode, JsonNode) - Static method in class org.gcube.common.software.utils.Utils

Clone node1 and merge all the properties contained in node2 into the cloned JsonNode.

METADATA_FIELD_NAME - Static variable in class org.gcube.common.software.processor.zenodo.ZenodoExporter

N

name - Variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

NAME_PROPERTY_NAME - Static variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

NEW - org.gcube.common.software.model.ElaborationType

newDeposition - Variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

newVersion() - Method in class org.gcube.common.software.processor.zenodo.ZenodoExporter

next - Variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

NONE - org.gcube.common.software.model.ElaborationType

O

objectMapper - Variable in class org.gcube.common.software.analyser.Analyser

objectMapper - Static variable in class org.gcube.common.software.utils.Utils

org.gcube.common.software.analyser - package org.gcube.common.software.analyser

org.gcube.common.software.config - package org.gcube.common.software.config

org.gcube.common.software.model - package org.gcube.common.software.model

org.gcube.common.software.processor - package org.gcube.common.software.processor

org.gcube.common.software.processor.biblatex - package org.gcube.common.software.processor.biblatex

org.gcube.common.software.processor.zenodo - package org.gcube.common.software.processor.zenodo

org.gcube.common.software.utils - package org.gcube.common.software.utils

originalJson - Variable in class org.gcube.common.software.model.GlobalConfig

originalJson - Variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

outputDirectory - Variable in class org.gcube.common.software.analyser.Analyser

outputDirectory - Variable in class org.gcube.common.software.processor.SoftwareArtifactProcessor

P

parse() - Method in class org.gcube.common.software.model.Variables

parseAndReplace() - Method in class org.gcube.common.software.model.Variables

parseTemplate(String) - Method in class org.gcube.common.software.processor.biblatex.BibLaTeXExporter

parseWith(Variables) - Method in class org.gcube.common.software.model.Variables

PATTERN - Static variable in class org.gcube.common.software.model.Variables

previous - Variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

PREVIOUS_CONCEPT_DOI_VALUE - Static variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

processorConfig - Variable in class org.gcube.common.software.processor.SoftwareArtifactProcessor

ProcessorConfig - Class in org.gcube.common.software.model

ProcessorConfig() - Constructor for class org.gcube.common.software.model.ProcessorConfig

processorConfigurations - Variable in class org.gcube.common.software.model.GlobalConfig

PROCESSORS_PROPERTY_NAME - Static variable in class org.gcube.common.software.model.GlobalConfig

properties - Static variable in class org.gcube.common.software.config.Config

properties - Variable in class org.gcube.common.software.model.GlobalConfig

properties - Variable in class org.gcube.common.software.model.ProcessorConfig

properties - Variable in class org.gcube.common.software.model.Variables

PROPERTIES_FILENAME - Static variable in class org.gcube.common.software.config.Config

publishToZenodo() - Method in class org.gcube.common.software.processor.zenodo.ZenodoExporter

R

RECORD_PATH - Static variable in class org.gcube.common.software.processor.zenodo.ZenodoExporter

REGEX - Static variable in class org.gcube.common.software.model.Variables

replaceAllVariables(String) - Method in class org.gcube.common.software.model.Variables

replaceAllVariables(String, String) - Method in class org.gcube.common.software.model.Variables

replaceVariable(String, String, String) - Static method in class org.gcube.common.software.utils.Utils

response - Variable in class org.gcube.common.software.processor.zenodo.ZenodoExporter

S

setArtifactMetadataArray(ArrayNode) - Method in class org.gcube.common.software.analyser.Analyser

setConceptDOIURL(String) - Method in class org.gcube.common.software.model.SoftwareArtifactMetadata

setDesiredName(String) - Method in class org.gcube.common.software.model.SoftwareArtifactFile

setFirst(boolean) - Method in class org.gcube.common.software.processor.SoftwareArtifactProcessor

setGlobalConfig(GlobalConfig) - Method in class org.gcube.common.software.processor.SoftwareArtifactProcessor

setGlobalConfiguration(ObjectNode) - Method in class org.gcube.common.software.analyser.Analyser

setLast(boolean) - Method in class org.gcube.common.software.processor.SoftwareArtifactProcessor

setNewDeposition(Boolean) - Method in class org.gcube.common.software.model.SoftwareArtifactMetadata

setOriginalJson(ObjectNode) - Method in class org.gcube.common.software.model.GlobalConfig

setOriginalJson(ObjectNode) - Method in class org.gcube.common.software.model.SoftwareArtifactMetadata

setOutputDirectory(File) - Method in class org.gcube.common.software.analyser.Analyser

setOutputDirectory(File) - Method in class org.gcube.common.software.processor.SoftwareArtifactProcessor

setPrevious(SoftwareArtifactMetadata) - Method in class org.gcube.common.software.model.SoftwareArtifactMetadata

setProcessorConfig(ProcessorConfig) - Method in class org.gcube.common.software.processor.SoftwareArtifactProcessor

setProperties(Map<String, Object>) - Method in class org.gcube.common.software.model.Variables

setSoftwareArtifactConfig(SoftwareArtifactMetadata) - Method in class org.gcube.common.software.processor.SoftwareArtifactProcessor

setURL(String) - Method in class org.gcube.common.software.model.SoftwareArtifactFile

setURL(URL) - Method in class org.gcube.common.software.model.SoftwareArtifactFile

setVersionDOIURL(String) - Method in class org.gcube.common.software.model.SoftwareArtifactMetadata

SKIP_GRANTS_CONFIG_FIELD_NAME - Static variable in class org.gcube.common.software.processor.zenodo.ZenodoExporter

SoftwareArtifactFile - Class in org.gcube.common.software.model

SoftwareArtifactFile() - Constructor for class org.gcube.common.software.model.SoftwareArtifactFile

softwareArtifactMetadata - Variable in class org.gcube.common.software.processor.SoftwareArtifactProcessor

SoftwareArtifactMetadata - Class in org.gcube.common.software.model

SoftwareArtifactMetadata() - Constructor for class org.gcube.common.software.model.SoftwareArtifactMetadata

SoftwareArtifactProcessor - Class in org.gcube.common.software.processor

SoftwareArtifactProcessor(String) - Constructor for class org.gcube.common.software.processor.SoftwareArtifactProcessor

T

TEMPLATE_FILENAME - Static variable in class org.gcube.common.software.processor.biblatex.BibLaTeXExporter

title - Variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

TITLE_PROPERTY_NAME - Static variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

U

update() - Method in class org.gcube.common.software.processor.zenodo.ZenodoExporter

UPDATE_ONLY - org.gcube.common.software.model.ElaborationType

updateMetadata() - Method in class org.gcube.common.software.processor.zenodo.ZenodoExporter

url - Variable in class org.gcube.common.software.model.SoftwareArtifactFile

Utils - Class in org.gcube.common.software.utils

Utils() - Constructor for class org.gcube.common.software.utils.Utils

V

valueOf(String) - Static method in enum org.gcube.common.software.model.ElaborationType

Returns the enum constant of this type with the specified name.

values() - Static method in enum org.gcube.common.software.model.ElaborationType

Returns an array containing the constants of this enum type, in the order they are declared.

Variables - Class in org.gcube.common.software.model

Variables() - Constructor for class org.gcube.common.software.model.Variables

version - Variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

VERSION_DOI_URL_PROPERTY_NAME - Static variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

VERSION_PROPERTY_NAME - Static variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

versionDOIURL - Variable in class org.gcube.common.software.model.SoftwareArtifactMetadata

W

writeObjectNodeToFile(ObjectNode, File) - Method in class org.gcube.common.software.processor.zenodo.ZenodoExporter

writeToFile(String) - Method in class org.gcube.common.software.processor.biblatex.BibLaTeXExporter

Z

zenodoBaseURL - Variable in class org.gcube.common.software.processor.zenodo.ZenodoExporter

ZenodoExporter - Class in org.gcube.common.software.processor.zenodo

ZenodoExporter() - Constructor for class org.gcube.common.software.processor.zenodo.ZenodoExporter

zenodoID - Variable in class org.gcube.common.software.processor.zenodo.ZenodoExporter

A B C D E F G H I K L M N O P R S T U V W Z
All Classes All Packages